BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H04LP1|AL429123
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1324 1724 0.0
3x_Contig951 934 0.0
>3x_Contig1324
Length = 5803
Score = 1724 bits (868), Expect = 0.0
Identities = 891/898 (99%), Gaps = 2/898 (0%)
Strand = Plus / Minus
Query: 1 ccaaaatcaaagcgtacatcaaagcaccatgaccggagcaaatgtggactggaccaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4882 ccaaaatcaaagcgtacatcaaagcaccatgaccggagcaaatgtggactggaccaccac 4823
Query: 61 ctgcgtaatctaaagcaccaagggcagccaaccaaccctctgggttccaagtccaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 ctgcgtaatctaaagcaccaagggcagccaaccaaccctctgggttccaagtccaacaag 4763
Query: 121 caattggacagtatacgatggtgatgaacaagaacaaaaagaccatcattgggaacaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4762 caattggacagtatacgatggtgatgaacaagaacaaaaagaccatcattgggaacaatc 4703
Query: 181 tagctctttcacaggcaccaccgaccatcaaaataccggtggcaatagcgaacatacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4702 tagctctttcacaggcaccaccgaccatcaaaataccggtggcaatagcgaacatacctt 4643
Query: 241 ggaaccaagcgaatacaatatcaggaacaacgccgacagcagaaggagcaccaagaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4642 ggaaccaagcgaatacaatatcaggaacaacgccgacagcagaaggagcaccaagaacat 4583
Query: 301 ctttgaaaccgaacatagataaagtaccgatgaatccgttacctcttgtcttagagaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4582 ctttgaaaccgaacatagataaagtaccgatgaatccgttacctcttgtcttagagaaca 4523
Query: 361 caagactgtaaccccaccaataccattggaaagtgaccacggcaatggtcataatggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4522 caagactgtaaccccaccaataccattggaaagtgaccacggcaatggtcataatggaag 4463
Query: 421 cccacaatagagacaaagcgtgcttttttctcgaaagaccagagtacaacaaaccgatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4462 cccacaatagagacaaagcgtgcttttttctcgaaagaccagagtacaacaaaccgatac 4403
Query: 481 ctgggaccatcaaccagacaaatgaaccagcaataaaaatccagaccatgtcagccttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4402 ctgggaccatcaaccagacaaatgaaccagcaataaaaatccagaccatgtcagccttgt 4343
Query: 541 catatggagcgttcaaatctgtatccaaagagttaccaccagtaccggtgtcagttggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4342 catatggagcgttcaaatctgtatccaaagagttaccaccagtaccggtgtcagttggaa 4283
Query: 601 tacctgtaaattcggacattgtaaaataataatatcggtgatgtctcaagataaaatcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4282 tacctgtaaattcggacattgtaaaataataatatcggtgatgtctcaagataaaatcga 4223
Query: 661 ataatctgggggratgttttcaagcaagaggttcaattgtccctaaaagtatatgtccca 720
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4222 ataatct-ggggaatgttttcaagcaagaggttcaattgtccctaaaagtatatgtccca 4164
Query: 721 ctaatgtttttggttgtacttttcctgctgaggkttgtttcctagatataaattttgaat 780
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4163 ctaatgtttttggttgtacttttcctgctgaggtttgtttcctagatataaattttgaat 4104
Query: 781 ggaatcagcattggccgatgagatattgagatgcaatcatcgtataccgccatatttata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4103 ggaatcagcattggccgatgagatattgagatgcaatcatcgtataccgccatatttata 4044
Query: 841 ccaaaaaattctcaattgagagaagcagatatatgcgt-gcggattgttgatgggrtc 897
|||||||||||||||||||||||||||||||||||||| || |||||||||||| ||
Sbjct: 4043 ccaaaaaattctcaattgagagaagcagatatatgcgtaccgcattgttgatgggatc 3986
>3x_Contig951
Length = 2832
Score = 934 bits (470), Expect = 0.0
Identities = 595/636 (93%), Gaps = 3/636 (0%)
Strand = Plus / Minus
Query: 1 ccaaaatcaaagcgtacatcaaagcaccatgaccggagcaaatgtggactggaccaccac 60
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1803 ccaaaatcaaagcgtaaatcaaagcaccgtgaccggagcaaatgtggactggaccaccac 1744
Query: 61 ctgcgtaatctaaagcaccaagggcagccaaccaaccctctgggttccaagtccaacaag 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1743 ctgcgtaatctaaagcaccaagggtagccaaccaaccctctgggttccaagtccaacaag 1684
Query: 121 caattggacagtatacgatggtgatgaacaagaacaaaaagaccatcattgggaacaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 caattggacagtatacgatggtgatgaacaagaacaaaaagaccatcattgggaacaatc 1624
Query: 181 tagctctttcacaggcaccaccgaccatcaaaataccggtggcaatagcgaacatacctt 240
||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||
Sbjct: 1623 tagctctttcacaggcaccaccgaccatcaaaataccggtgaccattgcgaacatacctt 1564
Query: 241 ggaaccaagcgaatacaatatcaggaacaacgccgacagcagaaggagcaccaagaacat 300
| ||||||||||||| ||||| |||||| || |||||||||||||||||||||| |
Sbjct: 1563 gaaaccaagcgaataagatatctggaacagtaccagcagcagaaggagcaccaagaacgt 1504
Query: 301 ctttgaaaccgaacatagataaagtaccgatgaatccgttacctcttgtctta---gaga 357
||||||||| || ||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 1503 ttttgaaaccaaattcggataaagtaccgatgaaaccgttacctcttgtattatgggaga 1444
Query: 358 acacaagactgtaaccccaccaataccattggaaagtgaccacggcaatggtcataatgg 417
||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 1443 acacaagactgtaaccccaccaataccattggaaagtgaccaccgaaatagtcataatgg 1384
Query: 418 aagcccacaatagagacaaagcgtgcttttttctcgaaagaccagagtacaacaaaccga 477
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 aagcccataatagagacaaagcgtgcttttttctcgaaagaccagagtacaacaaaccga 1324
Query: 478 tacctgggaccatcaaccagacaaatgaaccagcaataaaaatccagaccatgtcagcct 537
||||||||||||| ||||||||||||||||| |||| | ||||||| |||||| |||||
Sbjct: 1323 tacctgggaccattaaccagacaaatgaaccggcaaccataatccaggccatgttagcct 1264
Query: 538 tgtcatatggagcgttcaaatctgtatccaaagagttaccaccagtaccggtgtcagttg 597
|||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1263 tgtcatatggagtgttcaaatctgtatccaaagagttaccaccggttccggtgtcagttg 1204
Query: 598 gaatacctgtaaattcggacattgtaaaataataat 633
||||||||||||||||||||||||||||||||||||
Sbjct: 1203 gaatacctgtaaattcggacattgtaaaataataat 1168
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6499
Number of Sequences: 1807
Number of extensions: 6499
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 2
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)